Running with gitlab-runner 13.8.0 (775dd39d)  on dsop-shared-gitlab-runner-f887cbcbd-srgz6 E82_g8RG section_start:1630589496:resolve_secrets Resolving secrets section_end:1630589496:resolve_secrets section_start:1630589496:prepare_executor Preparing the "kubernetes" executor Using Kubernetes namespace: gitlab-runner-ironbank-dsop WARNING: Pulling GitLab Runner helper image from Docker Hub. Helper image is migrating to registry.gitlab.com, for more information see https://docs.gitlab.com/runner/configuration/advanced-configuration.html#migrating-helper-image-to-registrygitlabcom Using Kubernetes executor with image registry1.dso.mil/ironbank/opensource/clamav/clamav:0.103.2 ... section_end:1630589496:prepare_executor section_start:1630589496:prepare_script Preparing environment Waiting for pod gitlab-runner-ironbank-dsop/runner-e82g8rg-project-5089-concurrent-089rhk to be running, status is Pending Waiting for pod gitlab-runner-ironbank-dsop/runner-e82g8rg-project-5089-concurrent-089rhk to be running, status is Pending ContainersNotReady: "containers with unready status: [build helper istio-proxy]" ContainersNotReady: "containers with unready status: [build helper istio-proxy]" Waiting for pod gitlab-runner-ironbank-dsop/runner-e82g8rg-project-5089-concurrent-089rhk to be running, status is Pending ContainersNotReady: "containers with unready status: [build helper istio-proxy]" ContainersNotReady: "containers with unready status: [build helper istio-proxy]" Running on runner-e82g8rg-project-5089-concurrent-089rhk via dsop-shared-gitlab-runner-f887cbcbd-srgz6... section_end:1630589505:prepare_script section_start:1630589505:get_sources Getting source from Git repository $ until [ $(curl --fail --silent --output /dev/stderr --write-out "%{http_code}" localhost:15020/healthz/ready) -eq 200 ]; do echo Waiting for Sidecar; sleep 3 ; done ; echo Sidecar available; Sidecar available Fetching changes with git depth set to 50... Initialized empty Git repository in /builds/dsop/huron-digital-pathology/lagotto-dffp/.git/ Created fresh repository. Checking out 3fd6d3ce as development... Skipping object checkout, Git LFS is not installed. Skipping Git submodules setup section_end:1630589506:get_sources section_start:1630589506:download_artifacts Downloading artifacts Downloading artifacts for import-artifacts (6180192)... Downloading artifacts from coordinator... ok  id=6180192 responseStatus=200 OK token=9hU4NLVE WARNING: ci-artifacts/import-artifacts/: lchown ci-artifacts/import-artifacts/: operation not permitted (suppressing repeats) Downloading artifacts for load-scripts (6180187)... Downloading artifacts from coordinator... ok  id=6180187 responseStatus=200 OK token=swi4pPxP WARNING: ci-artifacts/[MASKED]/: lchown ci-artifacts/[MASKED]/: operation not permitted (suppressing repeats) section_end:1630589506:download_artifacts section_start:1630589506:step_script Executing "step_script" stage of the job script $ mkdir -p "${ARTIFACT_DIR}" $ "${PIPELINE_REPO_DIR}/stages/scan-artifacts/clamav-run.sh" % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 161 100 161 0 0 338 0 --:--:-- --:--:-- --:--:-- 338 4 216M 4 9059k 0 0 9.9M 0 0:00:21 --:--:-- 0:00:21 9.9M 41 216M 41 89.6M 0 0 47.4M 0 0:00:04 0:00:01 0:00:03 80.7M 86 216M 86 186M 0 0 64.7M 0 0:00:03 0:00:02 0:00:01 89.0M 100 216M 100 216M 0 0 68.7M 0 0:00:03 0:00:03 --:--:-- 91.9M ./ ./mirrors.dat ./daily.cvd ./main.cvd ./bytecode.cvd clamav definitions successfully installed. clamscan --version ClamAV 0.103.2/26281/Wed Sep 1 08:21:58 2021 Scanning /builds/dsop/huron-digital-pathology/lagotto-dffp/ci-artifacts/import-artifacts/external-resources/grpc-health-probe ----------- SCAN SUMMARY ----------- Known viruses: 8561908 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 10.12 MB Data read: 9.50 MB (ratio 1.06:1) Time: 17.419 sec (0 m 17 s) Start Date: 2021:09:02 13:31:51 End Date: 2021:09:02 13:32:09 Scanning /builds/dsop/huron-digital-pathology/lagotto-dffp/ci-artifacts/import-artifacts/external-resources/lagotto-dffp ----------- SCAN SUMMARY ----------- Known viruses: 8561908 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 19.26 MB Data read: 18.08 MB (ratio 1.07:1) Time: 18.487 sec (0 m 18 s) Start Date: 2021:09:02 13:32:09 End Date: 2021:09:02 13:32:27 Scanning /builds/dsop/huron-digital-pathology/lagotto-dffp/ci-artifacts/import-artifacts/external-resources/libopenslide.rpm ----------- SCAN SUMMARY ----------- Known viruses: 8561908 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 0.22 MB Data read: 0.11 MB (ratio 2.00:1) Time: 17.953 sec (0 m 17 s) Start Date: 2021:09:02 13:32:27 End Date: 2021:09:02 13:32:45 Scanning /builds/dsop/huron-digital-pathology/lagotto-dffp/ci-artifacts/import-artifacts/external-resources/libopenslide.so.0 ----------- SCAN SUMMARY ----------- Known viruses: 8561908 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 1.16 MB Data read: 1.09 MB (ratio 1.06:1) Time: 18.408 sec (0 m 18 s) Start Date: 2021:09:02 13:32:45 End Date: 2021:09:02 13:33:04 section_end:1630589584:step_script section_start:1630589584:upload_artifacts_on_success Uploading artifacts for successful job Uploading artifacts... ci-artifacts/scan-artifacts/clamav-scan/: found 2 matching files and directories Uploading artifacts as "archive" to coordinator... ok id=6180193 responseStatus=201 Created token=4nu2sf_p section_end:1630589585:upload_artifacts_on_success section_start:1630589585:cleanup_file_variables Cleaning up file based variables section_end:1630589585:cleanup_file_variables Job succeeded