Running with gitlab-runner 13.8.0 (775dd39d)  on dsop-shared-gitlab-runner-f887cbcbd-srgz6 E82_g8RG section_start:1630590214:resolve_secrets Resolving secrets section_end:1630590214:resolve_secrets section_start:1630590214:prepare_executor Preparing the "kubernetes" executor "ServiceAccount" overwritten with "ibfe" Using Kubernetes namespace: gitlab-runner-ironbank-dsop WARNING: Pulling GitLab Runner helper image from Docker Hub. Helper image is migrating to registry.gitlab.com, for more information see https://docs.gitlab.com/runner/configuration/advanced-configuration.html#migrating-helper-image-to-registrygitlabcom Using Kubernetes executor with image registry1.dso.mil/ironbank/ironbank-pipelines/pipeline-runner:0.3 ... section_end:1630590214:prepare_executor section_start:1630590214:prepare_script Preparing environment Waiting for pod gitlab-runner-ironbank-dsop/runner-e82g8rg-project-5089-concurrent-0w67xh to be running, status is Pending Waiting for pod gitlab-runner-ironbank-dsop/runner-e82g8rg-project-5089-concurrent-0w67xh to be running, status is Pending ContainersNotReady: "containers with unready status: [build helper istio-proxy]" ContainersNotReady: "containers with unready status: [build helper istio-proxy]" Running on runner-e82g8rg-project-5089-concurrent-0w67xh via dsop-shared-gitlab-runner-f887cbcbd-srgz6... section_end:1630590220:prepare_script section_start:1630590220:get_sources Getting source from Git repository $ until [ $(curl --fail --silent --output /dev/stderr --write-out "%{http_code}" localhost:15020/healthz/ready) -eq 200 ]; do echo Waiting for Sidecar; sleep 3 ; done ; echo Sidecar available; Sidecar available Fetching changes with git depth set to 50... Initialized empty Git repository in /builds/dsop/huron-digital-pathology/lagotto-dffp/.git/ Created fresh repository. Checking out 3fd6d3ce as development... Skipping object checkout, Git LFS is not installed. Skipping Git submodules setup section_end:1630590221:get_sources section_start:1630590221:download_artifacts Downloading artifacts Downloading artifacts for anchore-scan (6180196)... Downloading artifacts from coordinator... ok  id=6180196 responseStatus=200 OK token=NCRQg5Jc WARNING: ci-artifacts/scan-results/anchore/: lchown ci-artifacts/scan-results/anchore/: operation not permitted (suppressing repeats) Downloading artifacts for build (6180194)... Downloading artifacts from coordinator... ok  id=6180194 responseStatus=200 OK token=xsDBy3Bh WARNING: ci-artifacts/build/: lchown ci-artifacts/build/: operation not permitted (suppressing repeats) Downloading artifacts for csv-output (6180199)... Downloading artifacts from coordinator... ok  id=6180199 responseStatus=200 OK token=kwVxf3ox WARNING: ci-artifacts/scan-results/csvs/: lchown ci-artifacts/scan-results/csvs/: operation not permitted (suppressing repeats) Downloading artifacts for hardening-manifest (6180190)... Downloading artifacts from coordinator... ok  id=6180190 responseStatus=200 OK token=qfmkPxFd WARNING: ci-artifacts/preflight/: lchown ci-artifacts/preflight/: operation not permitted (suppressing repeats) Downloading artifacts for ib-manifest (6180201)... Downloading artifacts from coordinator... ok  id=6180201 responseStatus=200 OK token=7xzTysE_ WARNING: ci-artifacts/documentation/: lchown ci-artifacts/documentation/: operation not permitted (suppressing repeats) Downloading artifacts for load-scripts (6180187)... Downloading artifacts from coordinator... ok  id=6180187 responseStatus=200 OK token=swi4pPxP WARNING: ci-artifacts/[MASKED]/: lchown ci-artifacts/[MASKED]/: operation not permitted (suppressing repeats) Downloading artifacts for openscap-compliance (6180197)... Downloading artifacts from coordinator... ok  id=6180197 responseStatus=200 OK token=CN5E-sh4 WARNING: ci-artifacts/scan-results/openscap/: lchown ci-artifacts/scan-results/openscap/: operation not permitted (suppressing repeats) Downloading artifacts for twistlock-scan (6180198)... Downloading artifacts from coordinator... ok  id=6180198 responseStatus=200 OK token=Sa6-xn73 WARNING: ci-artifacts/scan-results/twistlock/: lchown ci-artifacts/scan-results/twistlock/: operation not permitted (suppressing repeats) Downloading artifacts for wl-compare-lint (6180191)... Downloading artifacts from coordinator... ok  id=6180191 responseStatus=200 OK token=EDTrZ4P9 WARNING: ci-artifacts/lint/: lchown ci-artifacts/lint/: operation not permitted (suppressing repeats) Downloading artifacts for write-json-docs (6180202)... Downloading artifacts from coordinator... ok  id=6180202 responseStatus=200 OK token=G7BV4h6S WARNING: ci-artifacts/documentation/: lchown ci-artifacts/documentation/: operation not permitted (suppressing repeats) section_end:1630590222:download_artifacts section_start:1630590222:step_script Executing "step_script" stage of the job script $ "${PIPELINE_REPO_DIR}/stages/s3/upload-to-s3-run.sh" INFO: Log level set to info testing/container-scan-reports/huron-digital-pathology/lagotto-dffp/repo_map.json Number of keywords detected: 3 Number of tags detected: 3 WARNING: ci-artifacts/lint/vat_api_findings.json does not exist, not copying into report LICENSE README.md anchore csvs documentation.json manifest.json openscap twistlock reports/ reports/documentation.json reports/manifest.json reports/anchore/ reports/anchore/anchore-version.txt reports/anchore/anchore_api_gates_full.json reports/anchore/anchore_api_security_full.json reports/anchore/anchore_gates.json reports/anchore/anchore_security.json reports/anchore/sbom/ reports/anchore/sbom/binary.json reports/anchore/sbom/files.json reports/anchore/sbom/gem.json reports/anchore/sbom/go.json reports/anchore/sbom/java.json reports/anchore/sbom/malware.json reports/anchore/sbom/npm.json reports/anchore/sbom/nuget.json reports/anchore/sbom/os.json reports/anchore/sbom/python.json reports/csvs/ reports/csvs/all_scans.xlsx reports/csvs/anchore_gates.csv reports/csvs/anchore_security.csv reports/csvs/lagotto-dffp:1.2.2-457457-justifications.xlsx reports/csvs/oscap.csv reports/csvs/summary.csv reports/csvs/tl.csv reports/csvs/sbom/ reports/csvs/sbom/gem.csv reports/csvs/sbom/go.csv reports/csvs/sbom/java.csv reports/csvs/sbom/malware.csv reports/csvs/sbom/npm.csv reports/csvs/sbom/nuget.csv reports/csvs/sbom/os.csv reports/csvs/sbom/python.csv reports/csvs/sbom/binary.csv reports/csvs/sbom/files.csv reports/openscap/ reports/openscap/compliance_output_report.xml reports/openscap/oscap-version.txt reports/openscap/report.html reports/twistlock/ reports/twistlock/twistlock-version.txt reports/twistlock/twistlock_cve.json reports/LICENSE reports/README.md INFO: Log level set to info INFO: Log level set to info INFO: Log level set to info INFO: Log level set to info ci-artifacts/scan-results/anchore/anchore-version.txt INFO: Log level set to info ci-artifacts/scan-results/anchore/anchore_api_gates_full.json INFO: Log level set to info ci-artifacts/scan-results/anchore/anchore_api_security_full.json INFO: Log level set to info ci-artifacts/scan-results/anchore/anchore_gates.json INFO: Log level set to info ci-artifacts/scan-results/anchore/anchore_security.json INFO: Log level set to info ci-artifacts/scan-results/anchore/sbom/binary.json INFO: Log level set to info ci-artifacts/scan-results/anchore/sbom/files.json INFO: Log level set to info ci-artifacts/scan-results/anchore/sbom/gem.json INFO: Log level set to info ci-artifacts/scan-results/anchore/sbom/go.json INFO: Log level set to info ci-artifacts/scan-results/anchore/sbom/java.json INFO: Log level set to info ci-artifacts/scan-results/anchore/sbom/malware.json INFO: Log level set to info ci-artifacts/scan-results/anchore/sbom/npm.json INFO: Log level set to info ci-artifacts/scan-results/anchore/sbom/nuget.json INFO: Log level set to info ci-artifacts/scan-results/anchore/sbom/os.json INFO: Log level set to info ci-artifacts/scan-results/anchore/sbom/python.json INFO: Log level set to info ci-artifacts/scan-results/csvs/all_scans.xlsx INFO: Log level set to info ci-artifacts/scan-results/csvs/anchore_gates.csv INFO: Log level set to info ci-artifacts/scan-results/csvs/anchore_security.csv INFO: Log level set to info ci-artifacts/scan-results/csvs/lagotto-dffp:1.2.2-457457-justifications.xlsx INFO: Log level set to info ci-artifacts/scan-results/csvs/oscap.csv INFO: Log level set to info ci-artifacts/scan-results/csvs/sbom/binary.csv INFO: Log level set to info ci-artifacts/scan-results/csvs/sbom/files.csv INFO: Log level set to info ci-artifacts/scan-results/csvs/sbom/gem.csv INFO: Log level set to info ci-artifacts/scan-results/csvs/sbom/go.csv INFO: Log level set to info ci-artifacts/scan-results/csvs/sbom/java.csv INFO: Log level set to info ci-artifacts/scan-results/csvs/sbom/malware.csv INFO: Log level set to info ci-artifacts/scan-results/csvs/sbom/npm.csv INFO: Log level set to info ci-artifacts/scan-results/csvs/sbom/nuget.csv INFO: Log level set to info ci-artifacts/scan-results/csvs/sbom/os.csv INFO: Log level set to info ci-artifacts/scan-results/csvs/sbom/python.csv INFO: Log level set to info ci-artifacts/scan-results/csvs/summary.csv INFO: Log level set to info ci-artifacts/scan-results/csvs/tl.csv INFO: Log level set to info ci-artifacts/scan-results/openscap/compliance_output_report.xml INFO: Log level set to info ci-artifacts/scan-results/openscap/oscap-version.txt INFO: Log level set to info ci-artifacts/scan-results/openscap/report.html INFO: Log level set to info ci-artifacts/scan-results/twistlock/twistlock-version.txt INFO: Log level set to info ci-artifacts/scan-results/twistlock/twistlock_cve.json INFO: Log level set to info INFO: Log level set to info INFO: Log level set to info INFO: Log level set to info section_end:1630590239:step_script section_start:1630590239:cleanup_file_variables Cleaning up file based variables section_end:1630590239:cleanup_file_variables Job succeeded