Running with gitlab-runner 13.8.0 (775dd39d)  on dsop-shared-gitlab-runner-f887cbcbd-srgz6 E82_g8RG section_start:1629476042:resolve_secrets Resolving secrets section_end:1629476042:resolve_secrets section_start:1629476042:prepare_executor Preparing the "kubernetes" executor Using Kubernetes namespace: gitlab-runner-ironbank-dsop WARNING: Pulling GitLab Runner helper image from Docker Hub. Helper image is migrating to registry.gitlab.com, for more information see https://docs.gitlab.com/runner/configuration/advanced-configuration.html#migrating-helper-image-to-registrygitlabcom Using Kubernetes executor with image registry1.dso.mil/ironbank/opensource/clamav/clamav:0.103.2 ... section_end:1629476043:prepare_executor section_start:1629476043:prepare_script Preparing environment Waiting for pod gitlab-runner-ironbank-dsop/runner-e82g8rg-project-6549-concurrent-1mzlp4 to be running, status is Pending Waiting for pod gitlab-runner-ironbank-dsop/runner-e82g8rg-project-6549-concurrent-1mzlp4 to be running, status is Pending ContainersNotReady: "containers with unready status: [build helper istio-proxy]" ContainersNotReady: "containers with unready status: [build helper istio-proxy]" Running on runner-e82g8rg-project-6549-concurrent-1mzlp4 via dsop-shared-gitlab-runner-f887cbcbd-srgz6... section_end:1629476049:prepare_script section_start:1629476049:get_sources Getting source from Git repository $ until [ $(curl --fail --silent --output /dev/stderr --write-out "%{http_code}" localhost:15020/healthz/ready) -eq 200 ]; do echo Waiting for Sidecar; sleep 3 ; done ; echo Sidecar available; Sidecar available Fetching changes with git depth set to 50... Initialized empty Git repository in /builds/dsop/opensource/r/r-studio/.git/ Created fresh repository. Checking out cbcbc755 as sato-153-mv... Skipping object checkout, Git LFS is not installed. Skipping Git submodules setup section_end:1629476049:get_sources section_start:1629476049:download_artifacts Downloading artifacts Downloading artifacts for import-artifacts (5816881)... Downloading artifacts from coordinator... ok  id=5816881 responseStatus=200 OK token=W-mktQYy WARNING: ci-artifacts/import-artifacts/: lchown ci-artifacts/import-artifacts/: operation not permitted (suppressing repeats) Downloading artifacts for load-scripts (5816876)... Downloading artifacts from coordinator... ok  id=5816876 responseStatus=200 OK token=ve3atLhQ WARNING: ci-artifacts/[MASKED]/: lchown ci-artifacts/[MASKED]/: operation not permitted (suppressing repeats) section_end:1629476051:download_artifacts section_start:1629476051:step_script Executing "step_script" stage of the job script $ mkdir -p "${ARTIFACT_DIR}" $ "${PIPELINE_REPO_DIR}/stages/scan-artifacts/clamav-run.sh" % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 161 100 161 0 0 1341 0 --:--:-- --:--:-- --:--:-- 1341 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 25 215M 25 54.6M 0 0 41.0M 0 0:00:05 0:00:01 0:00:04 58.2M 49 215M 49 106M 0 0 45.7M 0 0:00:04 0:00:02 0:00:02 55.0M 78 215M 78 169M 0 0 50.8M 0 0:00:04 0:00:03 0:00:01 57.6M 100 215M 100 215M 0 0 52.9M 0 0:00:04 0:00:04 --:--:-- 58.5M ./ ./mirrors.dat ./daily.cvd ./main.cvd ./bytecode.cvd clamav definitions successfully installed. clamscan --version ClamAV 0.103.2/26268/Thu Aug 19 08:20:50 2021 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/ModelMetrics_1.2.2.2.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 0.18 MB Data read: 0.02 MB (ratio 11.50:1) Time: 15.392 sec (0 m 15 s) Start Date: 2021:08:20 16:14:17 End Date: 2021:08:20 16:14:32 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/R6_2.5.1.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 0.54 MB Data read: 0.06 MB (ratio 9.20:1) Time: 15.527 sec (0 m 15 s) Start Date: 2021:08:20 16:14:32 End Date: 2021:08:20 16:14:48 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/RColorBrewer_1.1-2.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 0.15 MB Data read: 0.01 MB (ratio 19.50:1) Time: 15.288 sec (0 m 15 s) Start Date: 2021:08:20 16:14:48 End Date: 2021:08:20 16:15:03 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/RcppArmadillo_0.10.6.0.0.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 19.77 MB Data read: 1.59 MB (ratio 12.40:1) Time: 19.839 sec (0 m 19 s) Start Date: 2021:08:20 16:15:03 End Date: 2021:08:20 16:15:23 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/Rcpp_1.0.7.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 38.51 MB Data read: 2.80 MB (ratio 13.73:1) Time: 20.886 sec (0 m 20 s) Start Date: 2021:08:20 16:15:23 End Date: 2021:08:20 16:15:44 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/RhpcBLASctl_0.20-137.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 0.48 MB Data read: 0.04 MB (ratio 13.56:1) Time: 15.112 sec (0 m 15 s) Start Date: 2021:08:20 16:15:44 End Date: 2021:08:20 16:15:59 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/SQUAREM_2021.1.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 1.07 MB Data read: 0.23 MB (ratio 4.72:1) Time: 15.722 sec (0 m 15 s) Start Date: 2021:08:20 16:15:59 End Date: 2021:08:20 16:16:15 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/askpass_1.1.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 0.04 MB Data read: 0.00 MB (ratio 11.00:1) Time: 15.125 sec (0 m 15 s) Start Date: 2021:08:20 16:16:15 End Date: 2021:08:20 16:16:30 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/caret_6.0-88.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 59.14 MB Data read: 5.05 MB (ratio 11.70:1) Time: 19.043 sec (0 m 19 s) Start Date: 2021:08:20 16:16:30 End Date: 2021:08:20 16:16:49 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/cli_3.0.1.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 2.14 MB Data read: 0.21 MB (ratio 9.96:1) Time: 16.697 sec (0 m 16 s) Start Date: 2021:08:20 16:16:49 End Date: 2021:08:20 16:17:06 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/colorspace_2.0-2.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 16.24 MB Data read: 2.09 MB (ratio 7.76:1) Time: 16.987 sec (0 m 16 s) Start Date: 2021:08:20 16:17:06 End Date: 2021:08:20 16:17:22 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/compat-openssl10-1.0.2o-3.el8.x86_64.rpm ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 2.40 MB Data read: 1.13 MB (ratio 2.12:1) Time: 15.643 sec (0 m 15 s) Start Date: 2021:08:20 16:17:23 End Date: 2021:08:20 16:17:38 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/cpp11_0.3.1.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 2.50 MB Data read: 0.21 MB (ratio 12.08:1) Time: 15.840 sec (0 m 15 s) Start Date: 2021:08:20 16:17:38 End Date: 2021:08:20 16:17:54 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/crayon_1.4.1.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 0.25 MB Data read: 0.03 MB (ratio 8.00:1) Time: 15.384 sec (0 m 15 s) Start Date: 2021:08:20 16:17:54 End Date: 2021:08:20 16:18:09 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/curl_4.3.2.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 7.71 MB Data read: 0.75 MB (ratio 10.23:1) Time: 16.820 sec (0 m 16 s) Start Date: 2021:08:20 16:18:09 End Date: 2021:08:20 16:18:26 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/data.table_1.14.0.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 59.11 MB Data read: 5.05 MB (ratio 11.69:1) Time: 19.389 sec (0 m 19 s) Start Date: 2021:08:20 16:18:26 End Date: 2021:08:20 16:18:46 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/digest_0.6.27.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 1.57 MB Data read: 0.16 MB (ratio 10.07:1) Time: 16.065 sec (0 m 16 s) Start Date: 2021:08:20 16:18:46 End Date: 2021:08:20 16:19:02 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/dplyr_1.0.7.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 9.05 MB Data read: 0.81 MB (ratio 11.14:1) Time: 17.641 sec (0 m 17 s) Start Date: 2021:08:20 16:19:02 End Date: 2021:08:20 16:19:19 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/ellipsis_0.3.2.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 0.05 MB Data read: 0.00 MB (ratio 13.00:1) Time: 16.036 sec (0 m 16 s) Start Date: 2021:08:20 16:19:19 End Date: 2021:08:20 16:19:35 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/evaluate_0.14.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 0.20 MB Data read: 0.02 MB (ratio 10.00:1) Time: 15.674 sec (0 m 15 s) Start Date: 2021:08:20 16:19:35 End Date: 2021:08:20 16:19:51 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/fansi_0.5.0.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 6.67 MB Data read: 0.29 MB (ratio 23.38:1) Time: 15.712 sec (0 m 15 s) Start Date: 2021:08:20 16:19:51 End Date: 2021:08:20 16:20:07 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/farver_2.1.0.tar.gz ----------- SCAN SUMMARY ----------- Known viruses: 8559093 Engine version: 0.103.2 Scanned directories: 0 Scanned files: 1 Infected files: 0 Data scanned: 6.34 MB Data read: 1.22 MB (ratio 5.20:1) Time: 15.502 sec (0 m 15 s) Start Date: 2021:08:20 16:20:07 End Date: 2021:08:20 16:20:22 Scanning /builds/dsop/opensource/r/r-studio/ci-artifacts/import-artifacts/external-resources/float_0.2-4.tar.gz